GraphCL

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The error "AttributeError: can't set attribute"

1

File "/home/zhenghua/pythoncode/unsupervised_graph_TU/gsimclr.py", line 166, in dataset = TUDataset(path, name=DS, aug=args.aug).shuffle() File "/home/zhenghua/pythoncode/unsupervised_graph_TU/aug.py", line 73, in __init__ pre_filter) File "/home/zhenghua/.conda/envs/graphcontra/lib/python3.6/site-packages/torch_geometric/data/in_memory_dataset.py", line 56, in __init__ pre_filter) File "/home/zhenghua/.conda/envs/graphcontra/lib/python3.6/site-packages/torch_geometric/data/dataset.py", line 76, in __init__...

Austinzhenghua

Questin About semisupervised_MNIST_CIFAR10

2

Hi, I have read the paper and I want to know how to change the label rate of this?

csj3860

Error information when I run the, gsimclr.py --DS ENZYMES --lr 0.01 --local --num-gc-layers 3 --aug random4 --seed 0

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600 1 ================ lr: 0.01 num_features: 1 hidden_dim: 32 num_gc_layers: 3 ================ /opt/conda/conda-bld/pytorch_1623448224956/work/aten/src/ATen/native/cuda/Indexing.cu:702: indexSelectLargeIndex: block: [158,0,0], thread: [105,0,0] Assertion `srcIndex < srcSelectDimSize` failed. /opt/conda/conda-bld/pytorch_1623448224956/work/aten/src/ATen/native/cuda/Indexing.cu:702: indexSelectLargeIndex: block: [158,0,0], thread: [55,0,0] Assertion...

Austinzhenghua

Questin About semisupervised_MNIST_CIFAR10 dataset

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I have a question about these two datasets. there are three subset trainset, valset, and testset. How to combine these dataset to one whole set? Thank you. @yongduosui

Austinzhenghua

About semisupervised_MNIST_CIFAR10\pre-training\main_SBMs_node_classification.py

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There are no the script "from train.train_SBMs_node_classification import train_epoch, evaluate_network"

liuxy1103

About semisupervised_MNIST_CIFAR10

4

When I run main_superpixels_contrastive.py I got f = pickle.load(f) ModuleNotFoundError: No module named 'data.superpixels' I don't know why "f = pickle.load(f)" can cause this problem?

Austinzhenghua

install the enviroment failed

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pip install torch-scatter==1.1.0 -f https://pytorch-geometric.com/whl/torch-1.4.0.html pip install torch-sparse==0.4.4 -f https://pytorch-geometric.com/whl/torch-1.4.0.html pip install torch-cluster==1.4.5 -f https://pytorch-geometric.com/whl/torch-1.4.0.html pip install torch-spline-conv==1.1.0 -f https://pytorch-geometric.com/whl/torch-1.4.0.html pip install torch-vision==0.5.0 I am trying to install these but...

Austinzhenghua

Confusions with info_nce loss in gsimclr.py

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Thanks for your awesome codes, but I have some questions about `./unsupervised_TU/gsimclr.py` file. In the `loss_cal` function, the denominator will minus the positive pair `loss = pos_sim / (sim_matrix.sum(dim=1) -...

ZhuYun97

Can't load dataset file for semisupervised TU

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Hi, I have the problem of https://github.com/Shen-Lab/GraphCL/issues/4#issuecomment-742254458 and #1 trying lunching semisupervised TU pre training. I launch `python main.py --dataset MUTAG --aug1 random2 --aug2 random2 --lr 0.001 --suffix 0 --exp...

Ripper346

Bug report about superpixels graph classification

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Hello, When running the code, I find there is a bug from main_superpixels_contrastive.py. It reports as follows:  It is a DGL batch graph index bug. Could you fix it?...

googlebaba