Ryosuke-254

FileNotFoundError:

3

A FileNotFoundError: [Errno 2] No such file or directory: error occurs. This error appears when inputting long sequences or complex structures into the contigs. When generating proteins with simple structures,...

bug

1

When comparing the input and output values, it seems that the output values represent the central residue number of each contig from the input. For example, for the input range...

fine-tuning

1

Is it possible to perform fine-tuning for unconditional protein monomer generation with RF Diffusion on Colab, provided that the necessary dataset is available? If so, I would appreciate detailed instructions...

Hello, I would like to download the EvoDiff MSA OADM model, but I couldn't find it on Zenodo. Is the OAAR model the same as the OADM model? Would it...

I would like to fine-tune a pre-trained model for a specific protein. Is it possible to do this with EvoDiff sequences? If so, I am considering using a Jupyter Notebook...

using Google Colab's GPU

1

I want to run the following code using Google Colab's GPU, but while the GPU is briefly utilized, it is mostly not being used, which is causing problems. Could you...

'FileNotFoundError: [Errno 2] No such file or directory

2

I wrote the following code to select sequences with sequence identity below 0.8, using Google Colab, but I am encountering the error 'FileNotFoundError: [Errno 2] No such file or directory:...