rivuletpy

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QianMuXiao

ModuleNotFoundError: No module named 'msfm'

1

Dear dev, I installed the library in a fresh conda env as suggested and pip installed rivuletpy from both pip and github. After the installation, the rtrace command cannot be...

meliamne

ValueError: Failed to find TIFF header file (may be need to run: sudo apt-get install libtiff4-dev)

holiday01

I was wondering the developers could share an example usage for 3D CT slices such as for the lungs. Thank you.

ekmungi

Get Voxel array

1

Hi ,I'm try Rivulet2 on other tree structures from 3D medical images.Finally I also got .swc file and .vtk file.I opened the .vtk file, and the 3D model is the...

wangfeiyu-zerobug

soma object has no attribute 'pad'

7

Hello, I am tracing a neuron with a clear soma but I get this : python ./apps/rtrace -f testlila4.tif -t 25 -z 0.5 --soma --save-soma The shape of the image...

argunsah

Setup incompatible with pip3

2

Hello. When attempting to run the command `pip3 install rivuletpy` we get the error message `ERROR: Command errored out with exit status 1:` `command: 'c:\users\rennalabsa1\.anaconda\prompts\envs\riv\python.exe' -c 'import sys, setuptools, tokenize;...

mattar13

lsqshr