RNieuwenhuis

Results 9 comments of RNieuwenhuis

> 0.14-r312 and 0.15.1-r334 share the exactly same error correction part so that it is no need to run both of them. From the k-mer plots it seems there are...

Hi @KamilSJaron Thank you for your reply and making this a new thread. > A month is certainly too long. Did you run the KMC or the pythonic version? The...

I see, I am definitely willing to do a pull request. You prefer to do it on the pythonic version, correct? I saw that @tbenavi1 also tried the middle middle...

Were you able to reproduce the issue? I had another look at the code but I don't see the cause of the behavior. A nice example of how a test...

Had another look and it had to be the use of set() and the resizing of it, due to the iterative nature of the code, and hash randomization. I replaced...

@sunzhig Though I think the non-deterministic behaviour was solved with the described solution in [my earlier comment](https://github.com/KamilSJaron/smudgeplot/issues/70#issuecomment-681134920), you are definitely correct that the i1 and coverage1 are overwritten and then...

Hi all, I just encountered this same error message as OP. But from this thread I do not see what I need to change. My use case is on HiFi...

@BiocondaBot please add label

@BiocondaBot please add label