Prakrithi-P comments

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                                            Prakrithi-P

multiSampleComparisonClonalCN Error in vegaMC_R(mtx = mtx, output_file_name = paste("./output/", sample, : NA/NaN/Inf in foreign function call (arg 1)

Update: I realized I had to specify a list of the list of normal cells and not a list of normal cell matrices. However, I get the error [1] "...

Error in data.frame(..., check.names = FALSE) : arguments imply differing number of rows: 6435, 5148

Hi ! Has anyone figured this out? The single sample pipeline works well for most samples I tried but for a few, I get this error. Error in data.frame(..., check.names...

Error with LoadXenium

Hi, I am facing the same error. I have recent Xenium data. There is no transcripts.csv.gz file, which threw an error. I ran the below to fix that: library(arrow) transcripts