Harry Carey
Harry Carey
Great tool! I am curious, is whole-brain able to align sections with severe dorso-ventral skew? as in can we select arbitrary planes through the reference atlas or only warp a...
**Describe the bug** calibration-errors results in "Import error cannot import name 'get_board_type'" When i checked the calibration_errors.py file I saw that of all the imports from commons, get_board_type is the...
Hi, great site :) would there be capacity to integrate bioarxiv articles in the future. I am aware of forks which have done this but they seem to be offline.
sklearn has recently added support for nan_euclidean in nearest neighbors. This is described here: https://github.com/scikit-learn/scikit-learn/issues/25319 I see that cuml supports nan_euclidean in some places: ie; https://github.com/jakirkham/cuml/commit/d81465de97d3e62b0b20be3d25d42fd40ae6b215 however as of yet...
Hi, I have many corresponding points (more than 100) between two volumes. I would like to transform one volume to the other using these points. However, these volumes have vastly...
# Summary Sklearn has recently added support for the nan_euclidean as detailed in this issue https://github.com/scikit-learn/scikit-learn/issues/25319 Is it possible this will be added to faiss in the future? thank you.
fantastic package that I and my colleagues use daily. Just wwanted to let you know the New features page on the itksnap website is down. (see http://www.itksnap.org/pmwiki/pmwiki.php?n=Documentation.NewFeaturesVersion40 ). all the...
**Describe the bug** As described above when training a new finetuned model starting from nuclei everything appears to work correctly during training. it shows the following ```bash 2024-03-26 15:47:24,727 [INFO]...
https://github.com/PolarBean/DeepSlice/blob/main/DeepSlice/coord_post_processing/angle_methods.py#L108-L113 The issue is here where depths is not calculated if we use "mean" however it is referenced later on even though its not required