PaddleHelix

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the readme file for PaddleHelix /apps /protein_protein_interaction said " PPI S2F Code for "Multimodal Pre-Training Model for Sequence-based Prediction of Protein-Protein Interaction" will be released soon. " 1 year has...

linuxonly801

thank you

ikunpy

thank you

ikunpy

wanted to have a try on retrosysthesis module but it didn't work properly with empty result output. module link: https://paddlehelix.baidu.com/app/drug/retrosynthesis/forecast plz fix it, thanks!

biotech7

KTJ10086

 

lonngxiang

add c128 checkponit with corresponding config, refine reduce_dropout function in distribtued mode

1

Noisyntrain

Can I find code for LIT-PCBA dataset's 3D coordinates generation?

1

Hi, did you guys test GEM-2 model on LIT-PCBA by generating 3D coordinates from SMILES string? If then, can I find a code for it? Thank you.

Sangyeup

曙光超算上安装Helixfold遇到PaddlePaddle NotFoundError: Operator fused_gate_attention does not have kernel for {data_type[float]; data_layout[Undefined(AnyLayout)]; place[Place(cpu)]; library_type[PLAIN]}.

1

在DCU节点运行发生如下错误，安装的是此版本的paddle => https://baidu-nlp.bj.bcebos.com/PaddleHelix/HelixFold/paddlepaddle_rocm-0.0.0.dev628-cp37-cp37m-linux_x86_64.whl 

xiamr

change drug sensitivity dir

1

jinghu23