Olivier

### Description of the bug Hi! I think there's a very little bug in nf-core/tools. At [nf_core/pipeline-template/subworkflows/nf-core/utils_nextflow_pipeline/main.nf](https://github.com/nf-core/tools/blob/b478d8a498305ded64c825715a4dad0714c673cc/nf_core/pipeline-template/subworkflows/nf-core/utils_nextflow_pipeline/main.nf#L95), it should be: ``` debug(e.toString()) ``` instead of ``` debug(e) ``` ### Command...

Add parameter to get tool version

1

Hi, I noticed there is no parameter to only get tool version from the new k2 cli (unlike the previous kraken2 command). Adding it would help integrating it in workflows...

Issue when inspecting database

1

Hi, when running: `k2 inspect --db kraken2_db --threads 12` I get the following error: `Traceback (most recent call last): File "/home/coen/micromamba/envs/kraken/bin/k2", line 3848, in k2_main() ~~~~~~~^^ File "/home/coen/micromamba/envs/kraken/bin/k2", line 3766,...