Oliver Stuart

icon company Australian National University icon location Canberra, Australia icon location Oh gosh, I don't know.

Results 4 issues of Oliver Stuart

Cross-validation speed

1 comment

Hi, I'm trying to evaluate the three different methods shipped with this package on my data. The data is a 76x4623 matrix. Estimating `m` with `cv.lpca()` is extremely slow for...

PacBio CLR reads

1 comment

Hi there, Can Winnowmap be used with PacBio CLR reads rather than HiFi reads? Best, Ollie

Ambiguous bases

1 comment

Hi there, I am examining a wtdbg2.5 assembly and I have two contigs with short (23 bp) stretches of ambiguous N bases. This is not a problem per se but...

Empty .dict files

I've been trying to run vargeno on non-human data and running into problems at the indexing stage. No error is reported during the process, but the `.dict` files are both...