Taek Wizard
Taek Wizard
Hi, Thank you for the great program. While I am testing the samplot (v.1.2.0), I have bumped into a problem. FYI, Target species: Plant Raw reads: PacBio Sequel Aligner: Generated...
I am writing to bring to your attention a persistent issue I have encountered regarding job terminations, despite submitting them with an increased number of CPUs, utilizing up to 72...
Hi, Thank you for sharing this tool with the community. After reading the manual and issues, I would like to use DipAsm for my genome projects. FYI, Input data: PacBio...
Hello, I appreciate the excellent program you've provided. I have a couple of quick questions: Multiple input reads: Can I utilize both PacBio HiFi and ONT Ultra-long reads simultaneously? Multiple...
Hi all, Hope this email finds you well. I have questions for you about the Pore-C pipeline. The program was installed according to these links. https://github.com/nanoporetech/pore-c https://github.com/nanoporetech/Pore-C-Snakemake A simple test...
Hi all, Hope this email finds you well. I have questions for you about the Pore-C pipeline. The program was installed according to these links. https://github.com/nanoporetech/pore-c https://github.com/nanoporetech/Pore-C-Snakemake A simple test...
Hi, I am trying to install it on HPC (PBSpro) but II got this error. Followed "Developing the Snakemake pipeline" 1. Conda activated: tox and snakemake 2. git clone pore-c.git...
Hi, Thank you for the great program. According to your manual, it says: gapless.sh -j 30 -i assembly.fa.gz -t pb_clr data_pacbio_clr.fq.gz gapless.sh -j 30 -i assembly.fa.gz -t pb_hifi data_pacbio_hifi.fq.gz gapless.sh...
Thank you for the excellent program. I am currently testing the latest version with several parameters for ONT ultra-long read datasets. However, I noticed a potential omission in usage options...
### Description of feature Dear nf-core & pangenome team, I have a few questions about your great program. Based on the link (https://github.com/nf-core/pangenome/blob/1.0.0/modules/nf-core/wfmash/main.nf), it appears that wfmash performs all-vs-all alignment...