python-neo

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Object description metadata lost/wrong when saving NWB files

1

When saving Neo objects to NWB files using the NWBIO, the information in the `description` metadata field of several objects is lost or wrongly changed: * If two blocks are...

kohlerca

Adding support for Nicolet .e files

8

There is currently no support for .e files produced by NicoletOne systems (now aquired by Natus). Is anyone working on adding support for these files? If not, I will give...

MureziCapaul

Spikeglx: parse tcat input

15

**Describe the bug** I am unable to read in my `lf` files when using SpikeGLXRawIO. The file structure is currently as below. When I had all the `lf` files be...

tabedzki

Update NixRawIO to strictly follow RawIO data structure

5

This PR rewrites the IO to read only data that follow the RawIO restrictions. For loading old data `autogenerate_*` keywords were introduced to permit loading data, but ignoring inconsistent channel...

JuliaSprenger

memmap refactoring

10

This is a proposal to change the actual memap behavior in rawio layer. spikeinterface use neo.rawio a lot with extenssive IO demand with parralel read/computing. Many users experience big memmory...

samuelgarcia

Plexon2RawIO's implementation of _get_analogsignal_chunks can be improved

28

**Is your feature request related to a problem? Please describe.** The latest version of the PL2FileReader API includes a function capable of retrieving subsets of data from an analog channel....

nikhilchandra

I though that micromed was mono segment but apparently it can be multi segment. Here the implementation. This include a test that need theses two files to be merge in...

samuelgarcia

ebrains mirroring failing

2

Our action to mirror to ebrains is failing. Since this was set up by @apdavison do you want to try to figure this out. I just reran again on our...

zm711

EDF blocks access when io is opened.

8

This is coming from here in Spikeinterface: https://github.com/SpikeInterface/spikeinterface/issues/1228 Here, basically this format can't only be opened once per file-system. ```python from pathlib import Path from spikeinterface.extractors import EDFRecordingExtractor from spikeinterface.core.base...

h-mayorquin

BaseTestRawIO's setUp function deletes data needed for subsequent tests--on windows

10

**Describe the bug** I am putting together a unit test for issue #1546 ([Link](https://github.com/NeuralEnsemble/python-neo/pull/1546)) but when I try to run unittest.main() from test_plexon2rawio.py, the code breaks. **To Reproduce** 1. I...

nikhilchandra