MultiQC
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MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
### Description of bug Hi there. I found two bugs. 1. When running MultiQC `v1.22.*`, the software file pattern `*_mqc_versions.(yml|yaml)` is not being recognised or the file is ignored by...
See concatenated log file in https://community.seqera.io/t/samtools-coverage-output-not-found-by-multiqc/875/ Now throws warnings and continues parsing, instead of a hard crash.
### Description of bug Hi, The error we are encountering is not making MultiQC failing itself but we get disk quota issues. We are using an HPC as en environment...
On hold, pending potential move to docs.seqera.io Things to resolve: - [ ] Inline rendering of SVGs, to get custom fonts for Excalidraw
MultiQC is available via Spack: https://packages.spack.io/package.html?name=py-multiqc We document it here: https://multiqc.info/docs/getting_started/installation/#spack However, the recipe is well behind now and only updated to v1.15. We should take over maintainance and keep...
All of these TSV can be allowed as the custom content TSV, and the row starting with either FILE or #FILE should be interpreted as containing column names: ``` FILE...
### Description of feature Howdy! I've read the docs on [removing sections/modules](https://multiqc.info/docs/reports/customisation/#removing-modules-or-sections). However I believe what I'm trying to do is not covered there - fully remove columns from general...
Currently, the website automatically renders the module search patterns for each tool. For example: * [Docs page](https://multiqc.info/modules/adapterremoval/) * [Source markdown](https://github.com/MultiQC/MultiQC/blob/main/docs/modules/adapterremoval.md) * [Search pattern YAML](https://github.com/MultiQC/MultiQC/blob/034e1c05867475d5643dd439555229410aae5f02/multiqc/search_patterns.yaml#L5-L8) * [Website logic](https://github.com/MultiQC/website/blob/f4cce35160c8c62541a987872e6933f2231d2875/src/pages/modules/%5Bmodule%5D.astro#L31-L37) We want to...
### Description of bug Hi, when I use the multiqc to summarize the results of qc. I noticed that there some results are omitted due to the word "of" in...
Because in HTML we require element IDs to be unique, we have to somehow work around the custom content situation, where same ID can be used for a plot, a...