MrDotOne

Just pulled down the latest from github and tried to build 2.2.2 but got this error: Step 14/18 : RUN patch -p0 < /app/alphafold/docker/openmm.patch ---> Running in 08a4b9f1fb2c /bin/bash: /app/alphafold/docker/openmm.patch:...

Results owned by root

5

Finally got AA setup on a pretty beefy server and when i run the docker script i notice that the results are written as root. This may be a silly...

Docker permissions

18

Just pulled PAA down the other day and have running it, my run command is: /data/PrepareAA/docker/run_paa_docker.py -o /data/output -s Colo -t 16 --bam /data/Data/Colo/cofinal.bam --run_AA --run_AC however after 22+ hours...

2.2.2 build issues

6

Trying to build this on the HPC running CentOS 7 that i manage, and the instructions arent working: [root@cc-dclrilog61 samstat]# module list Currently Loaded Modulefiles: 7) hdf5_18/1.8.20 8) gcc/8.2.0 9)...