MouseLand

Results 10 repositories owned by MouseLand

Kilosort

407
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220
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Fast spike sorting with drift correction for up to a thousand channels

suite2p

327
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232
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cell detection in calcium imaging recordings

cellpose

1.2k
Stars
347
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a generalist algorithm for cellular segmentation with human-in-the-loop capabilities

facemap

150
Stars
57
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Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes singular value decomposition (SVD) of behavioral videos.

rastermap

161
Stars
41
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a visualization method for neural data

stringer-pachitariu-et-al-2018b

65
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21
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Responses of 10,000 neurons to 2,800 natural images

cellpose-napari

42
Stars
19
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napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool

pykilosort

50
Stars
30
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WIP: Python port of Kilosort2

stringer-et-al-2019

25
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12
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paper figure code

stringer-pachitariu-et-al-2018a

47
Stars
15
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Recordings of 10k neurons during spontaneous behaviors