BioPhi

BioPhi copied to clipboard

It's a minor thing, but it gave me a headache for a little while and I needed to dig through the code to see how the path specified via `--oasis-db`...

mhorlacher

I am trying to run the dev server using the instructions for development using docker compose. Once I try to build docker it fails at the stage => ERROR [biophi-main-web...

Marharyta1995

Is there a way to call alternative language models instead of the current one? With several of them emerging in recent literature, it might be handy to have the choice...

kettenbh

how to get sequence datasets?just like RU3, IAVI57,IAVI74 , and C38.

Veilhry

Currently the container images are quite big. There are a few things that could be done, such as using conda pack and two stage build that would hopefully decrease the...

mbestipa

Currently, the output of the humanization step returns a single fasta file. I would be interested in having the output have multiple sequences that are based on sampling from the...

mbestipa

I would like to run the tool using the cli instead of the web browser. Specifically, I saw that running the humanization using cdr grafting is not an option currently....

mbestipa

Hi there. Thank you very much for contributing to the project. I noticed that the code has some type checking, but not all of it does. I'm happy to try...

mbestipa

Error: module 'numpy' has no attribute 'int'

4

I got this message while trying to Export a Full Table after humanization. 

efrainceh

I'm getting the following error when running BioPhi from the command line. 

efrainceh