MaximilianNuber

Drop a single coefficient (one level from categorical variable) from formula/modelmatrix for Likelihood ratio test

6

Dear all, I am fitting MixedModels for large single cell datasets. One approach to test for covariates is to drop a single coefficient from the modelmatrix, which belongs to one...

aggregate_cells takes too long

2

Dear Dr. Mangiola, Thank you for the very nice package. I am working with large scale single cell RNA seq data and wnat to use tidySingleCellExperiment. I discovered that `aggregate_cells`...

Feature request: test for continuous variables and create design matrix from formula

1

Dear all, thank you for the great package, it´s a staple in my workflows. Recently, I had the task to analyze continuous covariates in my RNA-seq data. I know continuous...

Milo neighborhood groups as in MiloR

8

### Description of feature Dear all, I would like to ask for a feature in the Milo submodule: Grouping Neighborhoods, as implemented in MiloR (https://github.com/MarioniLab/miloR/blob/master/R/groupNhoods.R). @emdann suggested that I request...

Milo group nhoods

5

**PR Checklist** - [X] Referenced issue is linked - [X] If you've fixed a bug or added code that should be tested, add tests! - [ ] Documentation in `docs`...