Maxim Karpov

Hello, I've been unable to run AnnoPRO in GPU mode due to the requirement for old CUDA drivers; this is the error that I get: ``` tensorflow/stream_executor/platform/default/dso_loader.cc:64] Could not load...

Issues during checkpoints 2/3

2

Hello, I've encountered 2 different issues when running Finder on 2 separate genomes. 1) INFO: Creating SIF file... /softwares/FINDER/Finder/scripts/fixOverlappingAndMergedTranscripts.py:350: VisibleDeprecationWarning: Creating an ndarray from ragged nested sequences (which is a...

Distant exon prediction

2

Hello @sagnikbanerjee15, During the CodAn step, the execution terminates due to the missing annotation.gtf file when findCDS function is launched. This is because CodAn process terminates due to duplicate entries...

Hello, has anyone compared the performance of matplotlib-cpp against its Python-based counterpart? Some benchmarks would be nice to have displayed on the GitHub page.