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Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF

Results 125 spyglass issues
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**Describe the bug** A byproduct of my [deprecated factory util](https://github.com/LorenFrankLab/spyglass/blob/master/src/spyglass/utils/dj_helper_fn.py#L14), seen in use [here](https://github.com/LorenFrankLab/spyglass/blob/master/src/spyglass/common/common_position.py#L754) is that certain downstream tables cannot be imported before the factory is run. For example, if...

bug
position

- When populating `LinearizedPositionV1` for the first time in a database, I got an error that cannot call make within a transaction. - I think what happened is that the...

bug
position
merge

**Is your feature request related to a problem? Please describe.** Right now you have to populate many tables to run analyses; this may be cumbersome to users **Describe the solution...

enhancement

**Is your feature request related to a problem? Please describe.** Right now the Output tables (which are `merge` tables) are not very user-friendly because it only has merge id as...

enhancement

**Is your feature request related to a problem? Please describe.** Neuropixels 1.0 recordings separate LFP and AP band. We need to make sure spyglass can handle NWB files containing such...

enhancement

**Describe the bug** The position pipeline uses lab team as a folder name substring when declaring a new dlc project [here](https://github.com/LorenFrankLab/spyglass/blob/master/src/spyglass/position/v1/position_dlc_project.py#L308). This may include characters we would want to exclude...

enhancement
position

Work in progress PR aimed at reducing complexity on the position pipeline prior to feature adds

position

**Problem**: It is possible to run `common_behav.StateScript.populate` for a given key and have no resulting insert. This leaves previously attempted keys in the `key_source`, which will be re-attempted if re-run....

enhancement
common

**Is your feature request related to a problem? Please describe.** There is no way to add videos or new labeled data to a Deep Lab Cut project created in spyglass....

enhancement
position

**Is your feature request related to a problem? Please describe.** Achieve better tracking or 3D position. **Describe the solution you'd like** I want to be able to combine multiple simultaneous...

enhancement
position