spyglass

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WIP: adding pytests that require video

CBroz1

Currently, [AbstractGraph](https://github.com/LorenFrankLab/spyglass/blob/master/src/spyglass/utils/dj_graph.py#L151-L159) throws an error when it cannot find a table. It's possible that this table may not be in Spyglass. The error message could suggest users [spawn missing classes](https://datajoint.com/docs/core/datajoint-python/0.14/api/datajoint/__init__/#datajoint.schemas.Schema.spawn_missing_classes)...

CBroz1

Dandi export and read

3

# Description Partial steps for #861 - Step (3) - makes new table `DandiPath` - tracks translations between analysis file name and renamed path in a dandiset - has method...

samuelbray32

# Description related to #979 This is the logic of creating lab member and lab team upon NWB ingestion: 1. Read `experimenter` field from the nwb file, which contains names...

khl02007

Uniqueness of object_ids in generated analysis nwb files

3

**Is your feature request related to a problem? Please describe.** - In the current implementation of `AnalysisNwbfile.create()` the new nwb inherits the object id of both the nwb file and...

samuelbray32

generate merge suggestions for all sorted clusters

5

the goal is to generate a list of candidate pairs of clusters for manual burst merging. the attached notebook has the code that generates the metrics for similarity between all...

MichaelCoulter

Export notebook on JupyterHub

2

After merge of #875, we'll need to check the export notebook on the hhmi hub. We may need to edit the dj-config to specify the export dir as a user-specific...

CBroz1

Merge duplicate funcs

4

## Process While writing pytests, I noticed quite a few funcs that were copies of methods shared across tables, both across different versions of a pipeline and across different pipelines....

CBroz1

Remove unused tables

6

## Process Using a sql command, I fetched tables with no rows, as recorded in the info schema. Some weren't actually empty, so I narrowed down the list by fetching...

CBroz1

- `AnalysisNwbfileLog` has a field for `full_table_name` set to 64. - '`position_v1_dlc_cohort`.`__d_l_c_smooth_interp_cohort__body_part`' is 66 chars - Either the insert should truncate the table name or the field should be altered

CBroz1