Leon Hornich
Leon Hornich
Added nf-tests to ```modules/nf-core/crisprcleanr/normalize``` module Added: - ```crisprcleanr/normalize/tests``` subfolder containing ```main.nf.test```, ```main.nf.test.snap``` and ```tags.yml``` test runs successfully using ```nf-test test --tag crisprcleanr_normalize --profile docker```using docker
This is a very early stage implementation of the nf-gpt plugin into the pipeline. It can currently handles a list of genes extracted from the drugZ, bagel2 or mle module...
### Description of the bug The current link to a example contrast file (**dev branch documentation**) leads to https://raw.githubusercontent.com/nf-core/test-datasets/crisprseq/testdata/full_test/samplesheet_full.csv , which doesn't match the described and necessary file structure. ###...
### Description of the bug Under `usage`-> `screening` -> `Running the pipeline` the link to the example samplesheet leads to a non existing [.csv](https://github.com/nf-core/test-datasets/blob/crisprseq/testdata/count_table.csv) file. In the same folder exists...