Aaron Lun

Results 162 comments of Aaron Lun

Yeah, we should probably throw warnings and ignore unconvertible objects. Not familiar enough with **reticulate** to know exactly how to do that, though I suppose we could just always `try`...

Could just stick it on ExperimentHub and have **zellkonverter** Suggests EHub to pull it down. In fact, with this approach, you could put any number of arbitrarily large files and...

IMO I wouldn't think of it as a "worry", more of an investment for the future. Once paid, you have the process to just easily whack on more files to,...

Not a lot of information to go on here. Smells like a **Matrix** problem, that's where `cholmod_dense.c` is used.

What happens on the **anndata** side, without **scanpy**, when an object like this is saved to HDF5? We should be able to reproduce that logic to obtain some simple data...

Usually the creation of the **basilisk** environment would be accompanied by a lot of noise and thunder from Conda. I don't see any of this in the stdout above; and...

I'm down for that. We're close to the next BioC release and I'd like to spend what time we have left on checking the reader.

Will look at this later. I think we need to flip a few flags in `h5writeAttributes` to properly save it as a UTF-8 string scalar. What was the error?

I believe the multithreaded index is constructed by allowing each core to generate a certain number of trees. My memory's a bit fuzzy here, but I think each core gets...

Probably just a consequence of mimicking the default behavior for SE's `cbind`. In this case, the correct behavior would be to replace both versions with the _current_ version, given that...