Krithika B

Which GrCh38 reference file to use ?

1

Your documentation says to use "hg38 reference without alt contigs". Could you provide a link to which reference genome file you used ? I would like to try the same...

Can we plot SNPs on a circos plot ?

3

Is it possible to plot single nulcletotide polymorphisms (SNPs) on a circos plot ? A SNP has the same start and end position. For example, 1:207620289 (rs12081383) 1:207624395 (rs72644189)

How to plot SNPS

1

Is it possible to plot single nulcletotide polymorphisms (SNPs) on a circos plot ? A SNP has the same start and end position. For example, 1:207620289 (rs12081383) 1:207624395 (rs72644189)

The plots are very beautiful ! Wondering if you a example of how to do these plots on voom-limma normalized data ?

### Description of the bug Reference to this: https://github.com/nf-core/hic/issues/71 Hello ! Reopening this issue . I'm using nf-core/hic v2.1.0-gfe4ac65 on our HPC and when i use this setting , the...

I have a list of metabolites, In the form of metabolite names, and also in the form of KEGG Ids. How can i run enrichment analysis on this data ?...