Kristina Gagalova

Hi I have the same error, is there any chance you could exclude those reads instead of just throwing the error? Thank you in advance

Sorry, the distance track is not visible - the intron length of ```WAG0027609``` is ~30Kbp

Hi Gregg, Thank you for the help. I am running CAFE on genome predictions from very fragmented genomes and we know that we may miss some genes. I tried to...

Unfortunately, these solutions did not work for me. I ended up using ``` curl -Ls https://micromamba.snakepit.net/api/micromamba/linux-64/latest | tar -xvj bin/micromamba ``` That's sounds tricky to fix

Hi @TobyBaril I have a suggestion. Instead of downloading the database and configuring it, why don't we try to change manually the configuration file for a placeholder? The user would...

Since this looks so painful, I reiterate my previous message: we don't need to download databases; we can change the config file manually. That's the fastest way and will hopefully...

I am giving a list of bam files and it looks like its running them one at the time. I believe that one can be multi-threaded as well. Just a...

Thanks guys for the tool, I am using it for my project! All the best Kristina

Hi, Looks like you don't have the required perl libraries. Either install ForkManager or use a contaner

Is there a tool to convert a gtf to the required format? I am also having issues with that. Thank you in advance