Krishnaswamy Lab

PHATE (Potential of Heat-diffusion for Affinity-based Transition Embedding) is a tool for visualizing high dimensional data.

KrishnaswamyLab

MAGIC (Markov Affinity-based Graph Imputation of Cells), is a method for imputing missing values restoring structure of large biological datasets.

KrishnaswamyLab

Quantifying experimental perturbations at single cell resolution

KrishnaswamyLab

Archetypal Analysis network (AAnet)

KrishnaswamyLab

Code corresponding to the paper Diffusion Earth Mover's Distance and Distribution Embeddings

KrishnaswamyLab

Tools for building and manipulating graphs in Python

KrishnaswamyLab

Creating multi-resolution embeddings and clusters from high dimensional data

KrishnaswamyLab

PHATE dimensionality reduction method implemented in R

KrishnaswamyLab

a Transformer-based neural network for generating highly optimized protein sequences called Regularized Latent Space Optimization (RELSO)

KrishnaswamyLab

KrishnaswamyLab