Koeng101
Koeng101
@TimothyStiles Turns out I actually need this. I haven't implemented blow5, but slow5 is implemented here
I think it'd be great to benchmark against all of Genbank or uniprot or pdb. Would take a server with decent hard drives, or just a lot of data per...
Genbank I think is a little over a terabyte, so not that bad. Uniprot is like 250gb. SRA, on the other hand, is 33 petabytes (and the wayback machine is...
Any updates on the progress of this? I currently use litestream for backing up one of my databases - could I just run litestream on /litefs/database.db (given a static lease)...
Holy crap. That was fast.
I think I can explain a little bit. Gibson Assembly is an extremely popular DNA assembly method. It's used by pretty much everyone who isn't doing high-throughput work (where GoldenGate...
Some context: Linearfold is an RNA folding algorithm that works (basically) in linear time, which is pretty huge, because most algorithms are cubic. It is a newer algorithm and performs...
> So I know, what is there left to do for this issue? Actually getting it committed into Poly proper. We haven't done any work to make sure it all...
I think I talked to @TimothyStiles about this one, and basically - yea its both a problem here AND in `genbank`. It'd probably be easiest to fix from #339 branch,...
> ~un-errored:) too? I see that it's basically doing the same, but has some unclear todo action That's... uh unclear I think. Personally I think we should nuke polyjson -...