Khalid Usman

Hi, I applied scanpy on 1.3 millions neurons, [https://github.com/theislab/scanpy_usage/blob/master/170522_visualizing_one_million_cells/cluster.py], but i have different cluster labels (not predicted by louvain in scanpy). So i want to use my custom labels to...

support for weighted sampled data to rank genes and plot (dot, violin…

27

I have modified the following files in `scanpy` version `1.4`. 1. _anndata.py (added support for weighted sampling data , where each row has its non-zero weight, changes made for dotPlot,...

No such kernel named ir_4.0.2

1

Hi, I am running GLUE -> experiments -> TripleOmics and I got the following error in file `e01_inmf_nbconvert.log`. ``` [NbConvertApp] WARNING | Config option `kernel_spec_manager_class` not recognized by `NbConvertApp`. [NbConvertApp]...

Error in bash

7

 I have just configured the conda and when I try to run evaluation on GPU, I get the following error. Your guidance in...