Khalid Usman

Results 19 comments of Khalid Usman

@J-Mourad did you implement it?

Can someone share the trained model. Thanks

@Jeff1995 , I comment out two datasets and all the methods except GLUE, UnionCom, and Harmony. Still it showing me the above attached error.

@Jeff1995 I have modified the attached two files, please let me know if I am supposed to change other files, like` GLUE -> evaluation -> workflow -> methods.smk` or another...

@Jeff1995 When I run the following command after the above configurations. I got the error as attached. ![GLUE_Error](https://github.com/gao-lab/GLUE/assets/6439736/29d63dd5-ebeb-4be0-a98e-9dbccb5bdc96)

Then, I tried to perform some experiments and got the attached error. I am confused about what I am doing wrong. ![tripple-omics](https://github.com/gao-lab/GLUE/assets/6439736/1da9da04-ca4e-45dd-96c4-de240d253803)

> There’s a few items I’d like to see changed, and you should add tests. I have modified your suggestions , thanks. For tests you mean the 'test cases' or...

> Thank you! With “tests” I mean “functions named `test_*` with `assert ...` statements inside” Thanks for your guidance, I have added `test_weightedSampling.py` with a folder named `weighted_sampled` in _data...

I have removed issue from the pull request by the testing tool, now the tools showed me duplications, which are mostly from other code and 1-2 from my code. Please...

I was using scanpy for single cell dataset, but I have sampled data with weights instead of using all rows. So I found scanpy don't handle it and i was...