JulianFlesch

Hi there, neat idea. I'll get on it. A few things to clarify up front. @jfy133 Is there a curated text-format list of datasets other than this list of [github...

I don't think the list of pipelines alone is helpful for we are trying to achieve here @mirpedrol or am I missing something? If I understand @jfy133 correctly, he wants...

Alright! Feel free to check it out on my fork and let me know if you have any sugestions: https://github.com/JulianFlesch/nf-core-tools/tree/feature/test-datasets. I'll be wrap this up (hopefully by the end of...

I am having trouble recreating this issue. Did you solve this with the template update in you [PR](https://github.com/bigbio/quantms/pull/521) or only by removing the CI workflow?

Devcontainer docs for website: https://github.com/nf-core/website/pull/3575

How does this fit with the pipeline downloads refactoring @MatthiasZepper @jpfeuffer? Is this salvageable or maybe already covered by the PRs that were merged?

Ok, my revised suggestion: - Read the authenticated status from `gh_api` in favor of adding a new flag that uses `gh_api` anyway ([this comment](https://github.com/nf-core/tools/pull/3607#discussion_r2428475604)) - Keep the two `wf_download_url` to...

Hi @jpfeuffer , I will quickly commit my most recent comments and merge this PR. This is to avoid your feature becoming stale and to have this available in the...

I'm getting to work on this. ([Draft PR](https://github.com/nf-core/tools/pull/3569)) There are a couple things we should clarify / I need clarified: 1. What should be the new base image? 2. Do...

Ok thanks @mashehu and @mahesh-panchal for clarifying 👍 I think I misunderstood the purpose of how we want to use the devcontainer. So we need Docker-in-Docker as well to test...