Joon Klaps
Joon Klaps
I also encounterd this issue https://github.com/Joon-Klaps/viralgenie/actions/runs/7729194129/job/21071816540?pr=87#step:4:311: ``` .command.sh: line 12: 95 Illegal instruction (core dumped) calib_cons --threads 2 -c SRR11140748.cluster -q SRR11140748_R1.fastq.gz SRR11140748_R2.fastq.gz -o SRR11140748_dedup1. SRR11140748_dedup2. ``` Using a docker...
> I must confess, I'm starting to come around more to the third option (C). It means we get no interactivity, but it is true to the data and doesn't...
Waiting for https://github.com/nf-core/modules/pull/5555 to be merged
CI fails because of linting for a subworkflow I haven't touched 😕
Not Sure why conda test is failing though..
> It seems to be something tool specific. Maybe a wrong conda package? Yeah... doesn't seem something I'll be able to finish as part of this PR... https://github.com/andersen-lab/ivar/issues/93
Good point. I'll add a skip_freyja_boot and make sure that repeats are >0
python 3.6: https://github.com/arvestad/alv/actions/runs/13630037375/job/38095575149?pr=34#step:4:48 ``` Building wheels for collected packages: UNKNOWN Building wheel for UNKNOWN (pyproject.toml): started Building wheel for UNKNOWN (pyproject.toml): finished with status 'done' Created wheel for UNKNOWN: filename=UNKNOWN-0.0.0-py3-none-any.whl...
Could you write a quick test for this as well?
Thanks @mashehu ❤️