João Rodrigues

Hi @jadolfbr , any luck with the snippet? I would wager this is because of the "propagation" of parent ids, but hard to look at without a specific case.

Will have a look. Thanks for the report! A quinta, 17/05/2018, 07:55, Peter Cock escreveu: > Thanks - sadly bad news. Back to @JoaoRodrigues > to investigate... > > —...

I came across this yesterday actually and I found it quite weird. The result is a 3-item array and it should, I think, be indeed a single numeric value. This...

- As for dependencies, we usually avoid third-party dependencies as much as possible unless they are absolutely essential for functionality. - We might want to move to a new module...

Will check this tomorrow @JulianMaurin, I am not sure the `PDBServer` module is needed (as a separate module), but I need to see what you wrote. I had thought we...

Hey @JulianMaurin, all very good points! >If I may humbly challenge that. I feel like this new module helps to introduce new capabilities with the minimum impact on legacy code....

HTTPS is fine! From the website: ```wwPDB:[ ftp://ftp.wwpdb.org](ftp://ftp.wwpdb.org/), https://files.wwpdb.org/, rsync://rsync.wwpdb.org RCSB PDB (US):[ ftp://ftp.rcsb.org](ftp://ftp.rcsb.org/), https://files.rcsb.org/, rsync://rsync.rcsb.org (see the [download protocol below](https://www.wwpdb.org/ftp/pdb-ftp-sites#downloadPor)) RCSB PDB (US/AWS): https://s3.rcsb.org/ PDBe (UK): [ftp.ebi.ac.uk/pub/databases/pdb/](https://ftp.ebi.ac.uk/pub/databases/pdb/) PDBj (Japan):...

RE: FTP vs HTTPS. It's not about download speed of the structures, it's this single operation that takes forever to get, for some reason. In any case, have a look...

I'm gonna go ahead and close this since we discussed online that this falls a little out of the scope of the tools and requires a lot of maintenance (all...

Will do today. > Message ID: ***@***.***> >