Jessie940409

Hi there, When I ran snippy-core. Snippy includes reference in the alignment file, but I don't want the reference showed in the final tree. Can I just remove the ref...

How to construct a recombination free core SNP phylogenetic tree using snippy and gubbins?

1

Hi， I'm new to this and I want to construct a recombination free core SNP phylogenetic tree using snippy and gubbins. I'm confused because core.aln is a core SNP alignment...