Jack Fu
Jack Fu
Can you run `traceback()` after the failed call so I can help narrow in on what line is throwing the error? Thanks!
I would recommend leaving in the adjustment for library size. There is some systemic difference in library size between the 2 conditions, as you noted. I would hesitate to call...
Ballgown currently does not support using TPM, but only to the list of measures: `'arg' should be one of “cov”, “FPKM”, “rcount”, “ucount”, “mrcount”, “mcov”`. The package is not currently...
What does `getwd()` return right before you call `bg()`
Hi Sanderson, just checking - what version of R is it being installed to?
Will chime in to say that I will be incorporating explicit count of "remaining" samples this time around. Elissa had made last minute pre-launch changes so that the table added...
Hi @vllorens, what serendipitous timing. I JUST found this out myself as well. Thank you for already looking into it. I will continue with the search too, and we can...
It’s likely that this is an input issue and would be more appropriate on the bioconductor user forum. What does your readspertx look like?
What does the following show: head(readspertx) sum(readspertx)
If I’m understanding your query and the output you’ve shared with me, the output file size is within the realm of expectation. The input specified generates one file per sample,...