nmdegunst
nmdegunst
Hi guys, I'm currently working on this function and you can see my progress so far here: [added qza_to_tse function](https://github.com/jbisanz/qiime2R/compare/master...Insaynoah:qiime2R:master). I tested this on the moving-pictures dataset but I was...
I did indeed fork it. Here you can see the function I added [https://github.com/Insaynoah/qiime2R/blob/master/R/qza_to_tse.R](https://github.com/Insaynoah/qiime2R/blob/master/R/qza_to_tse.R) and here's the updated readme file with an example and a link to the oma book...
should all be good now
The calculateUnifrac file seems to implement it's own version of unifrac inspired from the phyloseq function without actually using other packages : [calculate_Unifrac.R](https://github.com/microbiome/mia/blob/devel/R/calculateUnifrac.R). I've been trying to find the difference...
I implemented the requested changes and ran the biocCheck which didn't seem to have any issue with the new lines. The taxa have to be mapped back to the originial...
However, I noticed that the issue was closed just after I made the PR. Was this already fixed ?
I'll keep an eye on this issue. Might be good to add an example in the book once it's easier to load in qza files and transform them into a...