Hocnonsense
Hocnonsense
 感谢!
- Feature request Recent years, `DASTool` is being popular. However, `DASTool` always put bins to `_DASTool_bins/`, so when I compare Bins from different folder, an `duplicate genome basenames` exception will...
conda version should be update to v1.14 to recognize blast v2.12 related issue: https://github.com/tseemann/prokka/issues/573#issuecomment-864046750 > Yes, it's clear that pokka v1.13 cannot - run with blast v2.11, and you are...
### Description parameter `--immediate-submit` is expected to [submit all jobs to the cluster instead of waiting for present input files](https://snakemake.readthedocs.io/en/stable/executing/cli.html?highlight=immediate#CLUSTER). However, as tested in the system, nothing changed compared to...
**Snakemake version** 7.12.0 or later **Describe the bug** These days I'm confused about submitting jobs to slurm system. Snakemake's doct says that snakemake can figure out the dependence of each...
The bug reported by #192 was reproducted on my machine as well as this blog. [](https://blog.csdn.net/tuanzide5233/article/details/83109527) my environment: R4.1 on Centos8 package: UpSetR version 1.4.0
snakefmt cannot format this code: ```smk if 1: rule a: input: a="a", run: for i in range(3): a = print( "a", "aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa", ) b = print( print( "sssssssssssssssssssssssssssssssssssssssssssssssss", b="b" )...
in [timspy](https://github.com/MatteoLacki/timspy), OpenTIMS.frame is converted as a `pd.DataFrame`, in which `self.frames["Id"]` will be a `pd.Series` and do not support the `[-1]` action. https://github.com/MatteoLacki/timspy/blob/c9e69e530a002accd2093d0235034732e173836e/timspy/df.py#L14-L24 To use `.min()` and `.max()`, these functions...
Changes: 1. new snakemake module style: 1. specify input via `ls *.fa > genome.fasta.ls` 2. import "src/PopCOGenT/PopCOGenT.smk" as a module with params specified 3. expect output: `genome-length_bias-0.000355362.cluster.tsv` 2. update python...
First of all, thanks for your repository! I'm trying to use this repository to estimate the temperature optima of my genomes. However, when I run it with 12 threads for...