Michael Savage

Hello, I am playing with the eMouse simulation to test out some parameters. The simulation has a benchmark script and output (output_clusters_metrics.txt) to compare to ground truth. See below for...

phy2 plugin access individual spike wavefrom from cluster

1

Hello, I am trying to write a plugin for some automatic spike removal to clean up a cluster. To do this I would like to compare an individual spike to...

Hello, I am working on a custom clustering plugin which seems to be working well. However at the end I would like to move a particular cluster to the 'noise'...

Colorization instance map question

5

Hello, So I have been playing around with the colorization feature in the morphometrics extraction pipeline. My question refers to the colorization instance map and how that relates to the...

Colouring indivdual scatter points

5

Hello, First of all this is a beautiful function and the plots look gorgeous. So I am plotting three violin plots on the same axis. However, I would like to...

Error trying to train models "raise source.error("bad escape %s" % escape, len(escape)) re.error: bad escape \m at position 10"

2

## Issue description Hello, So I am trying to train some microscopy segmentation models. I have run into a number of issues getting my data to load into the BIDS...

Error running demo_lightning_simulated on win10

2

Hello, So I get the following error on trying to run the demo notebook. I thought it might be related to this: https://stackoverflow.com/questions/47022997/jupyter-the-kernel-appears-to-have-died-it-will-restart-automatically But it might be a win10 specific...