Georges Kanaan
Georges Kanaan
@maartenbreddels it seems like 4.17 isn't available on conda-forge, so the default install people are getting (including myself) is 4.16 which has the wrong version of pydantic associated with it....
Ok it seems that this is due to the fact that 0 rows are left after coverage filtering. MethylKit unfortunately does not handle this very gracefully. @alexg9010 is there a...
Thanks for that solution.
Because I understand this exists in the context of broader changes that need be done (that are beyond my current mastery of the Anvi'o codebase), here is a temporary pseudo-solution...
@meren sidenote: while working on this I noticed an important typo [here](https://github.com/merenlab/anvio/blob/9cac782b4c89e6929bc5c877afaa77f0d3b50c24/anvio/drivers/prodigal.py#L49). I believe that line should read `v2.6.0`. I didn't want to make a pull request just for that...
That makes sense. I was wondering if the revamped mentioned in #2152 is thought of to affect the contigs-db or to involve the creation of new type of artifact centered...
Hi @meren I've run into an issue with my workaround and wanted to see if you had any ideas. My goal is to get list of gene calls, and a...
Hi @meren sorry this slipped by me for too long (I was on vacation last month). Your solution is great. I had worked around my work around so I lost...
After chatting with @meren at ISME (it was great!) I wanted to follow up on this. I'm keen on trying to implement this myself into anvio. I'm writing this comment...
On the left tool bar there is overlapping elements as shown. Also, could it be an option to have the data tab open on the right as it was before?...