dsk

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Histogram Rscript Error

1

I want to plot kmer coverage using the histogram plotting script provided. However, I am getting an odd error I am unable to troubleshoot. I have been able to kmerize...

camtelope

Unable to accomodate large k-mers

1

To support finding long k-mers, I tried re-installing in the build folder following instructions: ``` rm -Rf CMake* && cmake -DKSIZE_LIST="32 64 92" .. && make ``` where I chose...

b2jia

inconsistent result in comparison with jellyFish and kmer_counter

3

Correction: Actually, all three produced different results. ----------------------------------------------- Hello, I compared the outputs from DSK to the ones generated by [JellyFish](https://github.com/gmarcais/Jellyfish) and by [KMER_COUNTER](https://github.com/alexpreynolds/kmer-counter). I used the same .fa file...

YanaHrytsenko

solidity-custom

2

From a previous github issue in re Simka: "If you still need to recover kmer sequences, for instance recovering subsets of kmers according to their presence/absence in some datasets, you...

ctseto