Fabian Isensee
Fabian Isensee
Thanks everyone :-)
Honestly I don't know. What operating system are you using? What happens if you skip this step?
What I meant by skip is the `--verify_dataset_integrity` flag. You will still need to run preprocessing
Have you checked your RAM? Your images are rather large and need a lot of memory for preprocessing. Also give it some time. The cropping will save a lot of...
I think you RAM is full at some point and then the OS is killing your python processes. Since python multiprocessing does not recognize missing processes (which is a big...
Thanks @thijsgelton ! I feel like I need to repeat myself too often :see_no_evil:
@PeterMFull ?
but it sounds to me like you need to install fsl
@Yussef93 ?
https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/FslInstallation