Enzo Guerrero-Araya

Results 9 comments of Enzo Guerrero-Araya

I think the web server is blocking the requests. try to use less threads using the `-t` parameter. e.g. `fastmlst -t 2`

Hello @szhan, It looks like you're encountering a memory allocation error, which suggests that your system might not have enough resources available to handle the tasks being executed. This could...

Hello @szhan, Thanks for the updates. Typically, downloading schemes as performed by fastmlst should not be highly memory-intensive. This suggests that the issue you're experiencing may be related more to...

Thank you for your comment. It would be a good option. I'll leave this open, but I don't promise to add it soon.

This is indeed a significant issue, which I did not consider during the development of FastMLST. A potential solution that you could try is to install FastMLST using conda with...

What other commands are you unable to run? Adding an option to save the DB in a different path sounds reasonable!, but the downside is that this option would need...

That's a good idea; it shouldn't break any base code. I will modify the code and close this issue upon updating the code. Thank you for reporting this, and I...

Excellent! I'll be waiting for that feature!

Hey! I completely forget about this question. @SergeyBaikal maybe is better to use this package in python https://github.com/althonos/pyhmmer is much better than mine