Yoshiki Vázquez Baeza

Results 80 issues of Yoshiki Vázquez Baeza

- [ ] Add support to only export the tree that's currently visible on screen. - [ ] Change the dimensions of the page in the Python code (currently 4020x4020)...

barplots

It would be good to add a persistent warning which lets users know that ignoring branch lengths could be potentially misleading.

feature request

Not a pressing issue right now but would be great to have for the time when we need to re-generate these figures.

results

In unit tests where the same exception can be raised by multiple different cases it would be handy to also check for the error message. Since biom provides py2/py3 support...

When I go to https://biocore.github.io/gneiss/ and click on "Docs" it doesn't show documentation for the current release (0.4.2).

The text in the [landing page for this package's pypi page](https://pypi.python.org/pypi/gneiss/0.2.1) is currently written in markdown, AFAIK for PYPI to render this correctly the text should be formatted as RST.

It would be a fun to see if we can dump plots using [bashplotlib](https://github.com/glamp/bashplotlib).

enhancement
group discussion
plot related

The database should be encrypted, regardless of the information it stores (see #3 for some discussion).

enhancement

If the database is corrupted, or there's a problem, Keystats will crash immediately after the program launches. Here's the message that you get on the console: ``` 2015-01-01 13:41:08.994 Keystats[740:21656]...

bug
enhancement