Ekie22

Hello, after I rotate a node in a fan tree the tip labels are wrongly displayed. Adding an angle to geom_tiplab does not change anything. Is their a way to...

ncRNA prediction does not work

2

Hi, when running prokka 1.14.6 with --rfam 0 ncRNAs are found. With prokka 1.13 several were detected and running the cmscan code from the logfile separately also resulted in the...

Combine ggmsa plot and ggtree?

2

Hi, I am wondering if it is possible to combine the ggmsa plot with a ggtree. I tried it with aplot, but the alignment was not ordered according to the...

parsnp calculates genome size wrongly

1

Hi, I used parsnp for closed genomes with defined numbers of plasmids and recognized that the calculated genome size in the log file deviated from the given size of the...