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EBISPOT
GWAS Catalog Ontology and Curation Infrastructure
User story: As a user, I want easy access to browse all studies in the Catalog, and to be able to see GxE studies only. I want this to be...
Curators need access to the following metrics, to be generated weekly at 7pm on sunday evening: Detailed specifications are here: https://docs.google.com/document/d/1JA8VqKy685dZdyngpN0S-Kqw86uMMOFRwJAYctfL1wU/edit
3 out of 4 studies for this submission have no yamls on staging: GCST90429796-GCST90429798 (GCST90429795 has a yaml). Please generate the missing files.
The current file type for these 2 studies is GWAS-SSF, as the user has populated the beta and SE columns with values '0', and the z-score column is provided after...
Uploading literature to the old curation app generates an error message. Although we don't plan to use this functionality much longer, this should be investigated in case of a wider...
A user was able to create a submission with a duplicated study tag, and the metadata passed the validation, 0 studies, 0 samples and no GCSTs (https://www.ebi.ac.uk/gwas/deposition/submission/6687f8eff2bba90001a93384). Tested this with...
The submission needs to be reset for the user to reupload the template. The user added the same study tag for multiple studies, and the submission stats show 0 studies,...
Please delete '66714c4ed222f50001ba3be5' and all associated data on staging FTP. The user will submit again under a new GCP.