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Curation reporting

Open ljwh2 opened this issue 1 year ago • 2 comments

Curators need access to the following metrics, to be generated weekly at 7pm on sunday evening:

Detailed specifications are here: https://docs.google.com/document/d/1JA8VqKy685dZdyngpN0S-Kqw86uMMOFRwJAYctfL1wU/edit

ljwh2 avatar Jul 10 '24 08:07 ljwh2

this is reviewed by curators & good to be released to prod will be done asap.

sajo-ebi avatar Sep 04 '24 09:09 sajo-ebi

First author showing as null, needs fixing

@earlEBI please check user requested and Open targets are showing correctly, there are not many to test

ljwh2 avatar Sep 11 '24 09:09 ljwh2

Resolved the issues reported by Lizzy but Publication weekly stats didn't get generated due to some error will investigate & fix it before next run

sajo-ebi avatar Sep 18 '24 09:09 sajo-ebi

@Santhi1901 to provide list of sandbox PMIDs that are showing in prod report please, Sajo will delete them

ljwh2 avatar Sep 26 '24 13:09 ljwh2

I've placed the list of PMIDs that needs to be removed from prod: https://docs.google.com/spreadsheets/d/1t2rQTkERAbMvVfaRp2Dk4LrvO5cvNO48BkfqVwLk66s/edit?gid=1644809304#gid=1644809304

Some of them are not in the sandbox, and there is one publication with pmid as null; it is a duplicate copy of https://www.ebi.ac.uk/gwas/depo-curation/publications/64397b43c7f2a40001c2bac3

Santhi1901 avatar Sep 26 '24 13:09 Santhi1901

Hi @sajo-ebi create a bug ticket to fix the few extra issues reported

sprintell avatar Oct 02 '24 09:10 sprintell

First author showing as null, needs fixing

@earlEBI please check user requested and Open targets are showing correctly, there are not many to test

There is only one 'user requested' in the report, I assume this is correct from old L2 prioritisation spreadsheet which had 0 user-requested.

For the OT flag, I'm still not convinced this is being saved permanently. There are 3 OT flagged in the report. I will continue to monitor for a few weeks.

earlEBI avatar Oct 02 '24 10:10 earlEBI