goci
goci copied to clipboard
GWAS Catalog Ontology and Curation Infrastructure
When curators move sumstats to Globus, we can work on them from codon and then move to curation uploads folder with 'toglobus', but recently (approx. the last month) I have...
Related to https://app.zenhub.com/workspaces/gwas-59df823c4a6feb3786810391/issues/ebispot/goci/496 I will submit 533 studies - 486 metabolites with sumstats and the rest ratio traits without sumstats. Currently there are 453 sumstats files attached to GCST002443 There...
The studies need to be unpublished to update EFO. There are 150 studies with status published. and one study (study id: 101064081) with the status Requires review.
Greater Middle Eastern ancestry category is not imported into curation app from submission template
Greater Middle Eastern ancestry category is not imported into curation app from submission template, but it should be added to list of ancestry categories upon import. 
Mass gwas-curator emails generated by the curation app upon status change are causing issues for systems. This needs addressing to generate only a single email when the publication page is...
Bumps commons-text from 1.8 to 1.10.0. [](https://docs.github.com/en/github/managing-security-vulnerabilities/about-dependabot-security-updates#about-compatibility-scores) You can trigger a rebase of this PR by commenting `@dependabot rebase`. [//]: # (dependabot-automerge-start) [//]: # (dependabot-automerge-end) --- Dependabot commands...
This is a published submission, unpublished to add extra studies as requested by the user. But I am not able to import it. A user has already opened the submission...