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Submission not able to import:633c04e4c6aae200010a2ccf (PMID 36150907)

Open Santhi1901 opened this issue 2 years ago • 5 comments

This is a published submission, unpublished to add extra studies as requested by the user. But I am not able to import it. A user has already opened the submission for sumstats (submission id:6349908437db260001901267), not sure if it is because of that. PMID:36150907

Santhi1901 avatar Oct 19 '22 08:10 Santhi1901

@sajo-ebi A user created a new (sumstats-only?) submission for this PMID, but Santhi needed to edit the PMID to add some additional studies first. Now she is unable to import the edited submission. We think the solution might be to delete the users submission. Could you please confirm so we can follow up with the user?

ljwh2 avatar Oct 20 '22 08:10 ljwh2

@ljwh2 @Santhi1901 the submission status has been updated from backend it should be ready to import state now, for sumstats submission by user '6349908437db260001901267' since it is only in "STARTED" stage , i think user can proceed once the submission has been imported

sajo-ebi avatar Oct 25 '22 13:10 sajo-ebi

@sajo-ebi The additional studies are now added and published, but the https://www.ebi.ac.uk/gwas/deposition/submission/6349908437db260001901267 for sumstat submission is missing the download submission button

Santhi1901 avatar Oct 27 '22 10:10 Santhi1901

@Santhi1901 the download button is visible now not sure Depo Sync updates the status if tomorrow again the button is not visible let me know I will change status from backend

sajo-ebi avatar Dec 06 '22 16:12 sajo-ebi

@sajo-ebi For this, initially, there were only 3 studies published. After a request from the author, I added 7 more studies and published them. But when I downloaded the submission, only the initial 3 studies were available. https://www.ebi.ac.uk/gwas/publications/36150907

Santhi1901 avatar Dec 07 '22 09:12 Santhi1901

@sajo-ebi to look w/c 3rd Jan 2023

ljwh2 avatar Dec 21 '22 10:12 ljwh2

Noting that Elliot is now working on this submissions

ljwh2 avatar Jan 25 '23 10:01 ljwh2

The original submission has now been deleted. @ala-ebi loaded in the new studies, so I have now been able to create a new submission with the correct studies. I will handle the submission from here. There is just one issue with a possible duplicate sumstats file, which I have contacted the author about.

eks-ebi avatar Jan 31 '23 19:01 eks-ebi