Chi Liu comments

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                                            Chi Liu

warning from ggplot, NMDS, shape in ordination.

Thanks. I got it. I will consider optimizing this part to provide more options in the future version.

Trying to fix colors in plot_bar

Hi @cdeschamps63 1) Would you like to just remove the "Others" in legend? If so, please try to use bar_type parameter like this: ``` library(microeco) data(dataset) t1

trans_beta class

Hi. Do you mean only plotting the group centroids instead of sample points? If so, we can first merge samples into one for each group and then perform the following...

cal_abund, trans_abund$new and plot_bar does shows all classification in legends

Hi, I can not make sure where the issue come from. Could you please provide more information, such as the codes you used and your microtable object dataset?

cal_abund, trans_abund$new and plot_bar does shows all classification in legends

Hi, It is the prefix issue in the taxonomic table. In your tax_table of 'ms2', the prefix is like "k_" and "g_". In the previous version, this case was not...