Cyril Pernet
Cyril Pernet
when loading a study, the command window returns: ``` Rebuilding trial information structure for STUDY Warning: some datasets are continuous and trial information cannot be created ``` it would be...
The pop up says "Do you want to keep the unsuccessfully processed subjects" Would be great if there is no pop up during batch processing --> refers to wrongly assigned...
CFF
Since there is no direct paper to the toolbox, any of you guys wanna add a citation.cff so we can reference your awsome tool properly ... https://citation-file-format.github.io/ that would be...
I've seen the word 'modality' used in different context, for instance /anat and /func defined as 2 (MRI) modalities. Within BIDS, these are not since under 'Modality specific files', what...
a general comment related to https://github.com/bids-standard/bids-specification/pull/1021 - metadata.yaml is, in my mind, the BIDS set of definitions and therefore independent of DICOM - xxx.md is modality specific and can point...
be lovely to have it all as a single file to have all functions loaded - as an alternative as to devtools ; Rtools require compilation and on windows, doesn't...
Dear Chris, I'm not sure if all your colour maps have linear luminance change? I'm finishing to write a paper on data viz including something on colour maps and I...
could update line 476 def is_thresholded(nii_obj, thr=0.85): to add a conditional statement for structural data, as VBM likely not to get above 0.85%
have the ability to display slices with some overlay - anat + segmentation (this with slover maybe?) ideally also animated gif - image /mask - coreg anat/mean epi
spmup_anatQA - when plotting the orthogonal views, we should use V.mat and/or similar to get the right orientations! maybe some ready made functions in spm or part reusable -