Brady Johnston
Brady Johnston
`bcif` is the replacement for `mmtf`, and some databases such as RCSB are going to stop serving `mmtf` later this year. https://www.rcsb.org/news/feature/65a1af31c76ca3abcc925d0c
When streaming a trajectory from disk, if the positions of the atoms change dramatically the style surface node doesn't update properly and the boundaries of the surface stay where they...
The `mmtf` format will not longer be served by the RCSB later this year. Dropping it as an option for download (but keeping the parser) will be useful. Will also...
As of earlier this year, [`bpy`](https://pypi.org/project/bpy/) can now be installed from pip and is officially supported and maintained by the Blender developers. Because of this, [`molecularnodes`](https://pypi.org/project/molecularnodes/) can also now be...
In 4.0 I enabled an experimental feature, for automatically creating armature that can be used to animate the underlying atomic mesh, upon which MN creates the style. I am not...
Tracking the creation of new nodes: - [ ] Node for assigning a separate material to each chain (#379) - [ ] Color node for alphafold pldtt coloring #391 -...
Cellpack files can also be packaged as a `.zip` file, with each model being it's own separate `.bcif` file and then ` *_data.bin` file which I am assuming includes all...
Default values for colors and the like are currently set up in the nodes inside of the `.blend` file. This is opaque to `git` and not able to be changed...
With standalone downloader, we could now add a module to download directly from AlphaFold DB
Similar to the current 'separate by loose parts' which works most of the time to split protein into different chains. Would be good to have an operator which splits based...