Brady Johnston
Brady Johnston
Issue to track the improved DNA nodes: - [ ] Helix / double helix from curve - [ ] Instancing bases - [ ] Extracting curves from structures - [...
Issue to collect and track updating of documentation - [x] Update docs for ARM MDAnalysis install - [ ] Selections and how they work - [ ] Animated structures (NMR...
Some AH ribbons are a bit mangled, due to the current interpolation of rotations. This should be fixable by doing 'lofting' around the rotation plane of the helix, rather than...
Discussed a bit in #383, we should also include a number of color maps or LUTs for shading density. It would be best for these to match already existing standards...
While previously using `atomium` for parsing, `b_factor` on a per-model basis was available. With the switch to `Biotite`, this is currently not available and `b_factor` is now taken from the...
Referencing discussion in #20 about better methods fir distinguishing sugars and other modifications to the protein structure, as well as ligands. In example [`6WTH`](http://rcsb.org/structure/6WTH), the oligosaccharides are treated as separate...
I haven't looked deep into the codebase yet, but from what I can gather you use `pdb2pqr` to calculate the electrostatics of a system that you can then use for...
I'm excited to be able to try and use this software - but I am having trouble with the compilation step. Trying to compile on WSL on (Version `4.4.0-18362-Microsoft`) and...
An issue I was running into while trying to get the snapshots working in #6 , was that when trialling it on a quarto blog, while the `molstar.molj` file was...
Reading of svg / pdf is supported, but in the final figure it will be rasterised onto the ggplot object, even in PDF / svg output. Changing this behaviour so...