Brendan Osberg

Hi Aurelien. Thanks for the quick reply, and yes, the change from that comment seems to suffice. When I looked through the project's issues I was looking for things related...

If I can make a suggestion: It might be helpful to have an issue label (like "update"/"antiquated", or "version_sensitive" or s.t. like that) to indicate dependencies from older versions of...

Hi Jared. Thanks for the clarification and quick reply. I can see why leaving it this way might speed up things like regex comparisons, etc. > If the model_kmer field...

I'm encountering the same problem, but I think it's the same as issue #99 , so it might make things easier to keep the conversation in one place and look...

Thanks for developing this excellent resource. On this point, I'm happy with the current solution posted on [readthedocs](https://pyranges.readthedocs.io/en/latest/autoapi/pyranges/): `pr.PyRanges(pandas.read_table(f)) `, however, in terms of being 'too strict', using this appreach...

I support this for a plugin that's intended to be a "sensible" set of defaults that noone can object to. No human being will ever perceive a delay of 1...

I had this problem as well (certain the mnemonic was right after many attempts), and after trial and error, my solution was to 1) delete the nextcloud app from my...

do you mean rule-specific arguments? In bsseq, for example, `memory` is defined for each specific rule (with a default, in case one rule doesn't specify). In cases where they want...